1. Staff

Larry York, Ph.D. Publications

Publication List

Guo, H. & York, L. M. (2019). Reallocation to lateral and early-emerging axial roots allows maize (Zea mays L.) with reduced nodal root number to more efficiently forage for nitrate. BioRxiv, (preprint), doi: https://doi.org/10.1101/533042.

York, L. M. (2019). Functional phenomics: An emerging field integrating high-throughput phenotyping, physiology, and bioinformatics. Journal of Experimental Botany, 70 (2), 379-386 doi: 10.1093/jxb/ery379.

Mattupalli, C., Seethepalli, A., York, L. M. & Young, C. A. (2018). Digital imaging to evaluate root system architectural changes associated with soil biotic factors. BioRxiv, (preprint), doi: https://doi.org/10.1101/505321.

Huang, H., Liang, L., Sturrock, C. J., Pandey, B. K., Giri, J., Mairhofer, S., Wang, D., Muller, L., Tan, H., York, L. M., Yang, J., Song, Y., Kim, Y-J, Qiao, Y., Xu, J., Kepinski, S., Bennett, M. J. & Zhang, D. (2018). Rice actin binding protein RMD controls crown root angle in response to external phosphate. Nature Communications, 9 (2346), doi: 10.1038/s41467-018-04710-x.

York, L. M. (2018). Why roots matter to soil, plants and you. Noble News & Views, June 1, pg. 8-9.

Seethepalli, A., York, L. M., Almtarfi, H., Fritschi, F. B. & Zare, A. (2018). A novel multi-perspective imaging platform (M-PIP) for phenotyping soybean root crowns in the field increases throughput and separation ability of genotype root properties. BioRxiv, (preprint), doi: https://doi.org/10.1101/309161.

York, L. M., Slack, S., Bennett, M. J. & Foulkes, J. (2018). Wheat shovelomics I: A field phenotyping approach for characterising the structure and function of root systems in tillering species. BioRxiv, (preprint), doi: https://doi.org/10.1101/280875.

Slack, S., York, L. M., Roghazai, Y., Lynch, J., Bennett, M. J. & Foulkes, J. (2018). Wheat shovelomics II: Revealing relationships between root crown traits and crop growth. BioRxiv, (preprint), doi: https://doi.org/10.1101/280917.

York, L. M. (2018). Phenotyping crop root crowns: General guidance and specific protocols for maize, wheat, and soybean. In Ristova D., Barbez E. (eds), Root Development. Methods in Molecular Biology. (pp. 23-32). New York, NY: Springer New York.

York, L. M. & Lobet, G. (2017). Phenomics of root system architecture: Measuring and analyzing root phenes. Teaching Tools in Plant Biology: Lecture Notes. Plant Cell, 29 (9), doi: 10.1105/tpc.117.tt0917.

York, L. M., Carminati, A., Mooney, S. J., Ritz, K. & Bennett, M. J. (2016). The holistic rhizosphere: integrating zones, processes, and semantics in the soil influenced by roots. Journal of Experimental Botany, 67 (12), 3629-3643 doi:10.1093/jxb/erw108.

York, L. M., Silberbush, M. & Lynch, J. (2016). Spatiotemporal variation of nitrate uptake kinetics within the maize (Zea mays L.) root system is associated with greater nitrate uptake and interactions with architectural phenes. Journal of Experimental Botany, 67 (12), 3763-3775 doi:10.1093/jxb/erw133.

Colombi, T., Kirchgessne, N., Le Marié, C. A., York, L. M., Lynch, J. & Hund, A. (2015). Next generation shovelomics: set up a tent and REST. Plant and Soil, 388 (1), 1-20 doi:10.1007/s11104-015-2379-7.

York, L. M., Galindo-Castañeda, T., Schussler, J. R. & Lynch, J. (2015). Evolution of US maize (Zea mays L.) root system architectural and anatomical phenes over the past 100 years corresponds to increased tolerance of nitrogen stress. Journal of Experimental Botany, 66 (8), 2347-2358 doi:10.1093/jxb/erv074.

York, L. M. & Lynch, J. (2015). Intensive field phenotyping of maize (Zea mays L.) root crowns identifies phenes and phene integration associated with plant growth and nitrogen acquisition. Journal of Experimental Botany, 66 (18), 5493-5505 doi:10.1093/jxb/erv241.

Bucksch, A., Burridge, J., York, L. M., Das, D., Nord, E. A., Weitz, J. S. & Lynch, J. (2014). Image-Based High-Throughput Field Phenotyping of Crop Roots. Plant Physiology, 166 (2), 470-486 http://dx.doi.org/10.1104/pp.114.243519.

Zhang, C., Postma, J. A., York, L. M. & Lynch, J. (2014). Root foraging elicits niche complementarity-dependent overyielding in the ancient 'three sisters' (maize, bean, squash) polycultures. Annals of Botany, 114 (8), 1719-1733 doi:10.1093/aob/mcu191.

York, L. M., Nord, E. A. & Lynch, J. (2013). Integration of root phenes for soil resource acquisition. Frontiers in Plant Science, 4 (355), doi: 10.3389/fpls.2013.00355.