ISBN 0-9754303-1-9
Preface to the Medicago truncatula Handbook
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| Biology of Medicago truncatula |
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- Morphology, development and plant architecture of M. truncatula
- Vegetative development (D. Moreau)
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Evolutionary and Ecological Genetics of Medicago truncatula (T. Bataillon, J. Ronfort) |
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Seed Biology of Medicago truncatula (K. Gallardo, C. Lesignor, M. Darmency, J. Burstin, R. Thompson, C. Rochat, J.-P. Boutin, H. Kuester, J. Buitink, O. Leprince, A. Limami, M.A. Grusak) |
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Response of Medicago truncatula to abiotic stress (A.M. Limami, C. Ricoult, E. Planchet, E.M. González, R. Ladrera, E. Larrainzar, C.Arrese-Igor, F. Merchan, M. Crespi, F. Frugier, K. Avia, I. Lejeune-Hénaut) |
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- Symbiotic interactions
- • Arbuscular mycorrhiza (V. Gianinazzi-Pearson, I. Maldonado-Mendoza, M. Lopez-Meyer, S. Weidmann and M. J. Harrison)
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- Pathogenic interactions
- • Fungi (S. Ellwood, J. Lichtenzveig, T. Pfaff, L. Kamphuis, R. Oliver)
• Medicago truncatula as a model for studying interactions between root parasitic plants and legumes (A. Pérez-de-Luque, M.D. Lozano, A.M. Maldonado, J.V. Jorrín, M.A. Dita, J. Die, B. Román, D. Rubiales)
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| M. truncatula resources |
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M. truncatula stock centre (R. Nair , S.J. Hughes, S. Ellwood, R. Oliver, S.L. Green, M. Delalande, J. Wen, G. Oldroyd) |
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Wild accessions/populations (S. Greene, S.J. Hughes, R. Nair, T. Huguet, M.E. Aouani, J.M. Prosperi, M. Delalande) |
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Medicago truncatula cultivars (R. Nair, J. Howie, M. Delalande) |
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- Bionformatics resources for Medicago truncatula - 2006
- • UrMeLDB: The European Medicago genome database (K. Mayer et al.)
• Medicagoo: Searching Medicago resources (J. Gouzy et al.)
• EST analysis and expression profiling software from Bielefeld University (H. Küster et al.)
• The Legume Information System (LIS): An integrated, dynamic comparative legume information resource (G.D. May et al.)
• MtDB and medicago.org (E. Retzel, et al.)
• The Medicago truncatula Genome Sequencing Website (N.D. Young, et al.) |
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Medicago truncatula cDNA and genomic libraries (P. Gamas, F. Debellé, H. Berges, L. Godiard, A. Niebel, E.P. Journet, J. Gouzy) |
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Mutant gene nomenclature in Medicago truncatula (J. Frugoli) |
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| M. truncatula protocol chapters |
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Handling Medicago truncatula as a whole plant:
growth, propagation, crossings, as well as abiotic stress and interactions with other organisms |
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Overview (E-P Journet) |
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Seed storage and germination (J. Garcia, D.G. Barker and E-P Journet) |
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Growing M. truncatula: choice of substrates and growth conditions (D.G. Barker, T. Pfaff, D. Moreau, E. Groves, S. Ruffel, M. Lepetit, S. Whitehand, F. Maillet, R. M. Nair, E-P Journet) |
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Vernalization, crossings and testing for pollen viability (M. Chabaud, J. Lichtenzveig, S. Ellwood, T. Pfaff, E-P Journet) |
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Medicago truncatula hybridization – supplemental videos (M. Taylor, L. Blaylock, J. Nakashima, D. McAbee, J. Ford, M. Harrison, M. Udvardi) |
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Phenotyping (D. Moreau, V. Bourion, S. Fournier, H. De Larambergue, G. Duc, C. Salon, A.S.Voisin, C. Jeudy) |
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Cuttings and grafts (S. Cros-Arteil, T. Pfaff, D.G. Barker and E-P Journet) |
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Rhizobial inoculation and nodulation of Medicago truncatula (E-P Journet, F. de Carvalho-Niebel, A. Andriankaja, T. Huguet, D.G. Barker) |
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Inoculation and growth with mycorrhizal fungi (M. Chabaud, M. Harrison, F. de Carvalho-Niebel, G. Bécard, D G. Barker) |
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Inoculation and growth with soil borne pathogenic fungi (J. Lichtenzveig, J. Anderson, G. Thomas, R. Oliver, K. Singh) |
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Inoculation and growth with foliar pathogenic fungi (S. Ellwood, L. Kamphuis, T. Pfaff, R. Oliver, D. Samac, D. Foster-Hartnett, B. Tivoli, C. Onfroy, A. Moussart, Villegas A.M., Sillero J.C., Rubiales D.) |
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Inoculation and growth with root parasitic weeds (M. Fernández-Aparicio, A. Pérez-de-Luque, M.D. Lozano, D. Rubiales) |
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Medicago truncatula resistance to Oomycetes (A. Moussart, B. Tivoli, D. Samac, N. D'Souza) |
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Medicago truncatula interaction with insects (O. Edwards, J. Klingler, L. Gao, K. Korth, K. Singh) |
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| Cytology and microscopy |
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Immunolocalization (B. Hause, F. Frugier, M. Crespi) |
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Flow cytometry (ploidy determination, cell cycle analysis, DNA content per nucleus) (S.J. Ochatt) |
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| Transformation and tissue culture |
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Cell suspension cultures (A. Iantcheva, M. Vlahova, A. Atanassov, A. S. Duque, S. Araújo, D. F. dos Santos, P. Fevereiro) |
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Agrobacterium rhizogenes-mediated root transformation (M. Chabaud, A. Boisson-Dernier, J. Zhang, C.G. Taylor, O. Yu, D.G. Barker) |
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Agrobacterium tumefaciens-mediated transformation and in vitro plant regeneration of M. truncatula (M. Chabaud, P. Ratet, S. de Sousa Araújo, A.S. Roldão Lopes Amaral Duque, M. Harrison, D.G. Barker) |
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Somatic embryogenesis from leaf explants (A. Iantcheva, M. Vlahova, A. Atanassov) |
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| Genetic mapping |
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Comparative mapping (A. Seres, G. Deák, G. Tóth, G. Aubert, J. Burstin, N. Ellis, G. B. Kiss) |
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| Tools for gene identification, silencing and knockout and mutant screening |
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Mutant generation using gamma rays (G. Duc, A. Pelletier) |
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Insertional mutagenesis in M. truncatula using Tnt1 retrotransposon (P. Ratet, A. Porcedu, M. Tadege, K.S. Mysore) |
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Mutant screening / phenology key (D. Moreau and N. Munier-Jolain) |
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Sharing phenotypic data: A coding system and a developmental model (J. Hanan, B. Bucciarelli, C.P. Vance) |
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| Functional genomics |
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Transcriptomics (H. Küster, A. Becker, D. Samac, M. Tesfaye) |
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Proteomics (S. Nagaraj, Z. Lei, B. Watson, L. Sumner, K. Gallardo, E. Dumas-Gaudot, G. Recorbet, F. Robert, O. Thiery, B. Valot, U. Mathesius, E. Triplett) |
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