Bouton, J.H. 2007. Molecular breeding of switchgrass as a bioenergy crop. Current Opinions in Genetics & Development. (In press).

Dixon, R.A., J.H. Bouton, B. Narasimhamoorthy, M. Saha, Z. Wang, and G.D. May. 2007. Beyond structural genomics for plant science. Advances in Agronomy. 95:77-161.

Brummer, E.C., J.H. Bouton, and M. Sledge. 2007. Biotechnology and molecular approaches to forage improvement. p. 439-451. In R.F. Barnes, C.J. Nelson, K.J. Moore, and M. Collins (ed.) Forages, 6^th Edition, Volume II – The Science of Grassland Agriculture, Blackwell Publishing, Ames, IA.

Zhang, Y., M.K. Sledge, and J.H. Bouton. 2007. Genome mapping of white clover (Trifolium repens L.) and comparative analysis within the Trifolieae using cross-species SSR markers. Theor. Appl. Genet. [Online] (verified 1 May 2007).

Narasimhamoorthy, B., J.H. Bouton, E.B. Blancaflor, and M.K. Sledge. 2007. A comparison of hydroponics, soil, and root staining methods for evaluation of aluminum tolerance in Medicago truncatula (barrel medic) germplasm. Crop Sci. 47:321-328.

Bouton, J.H. 2007. The economic benefits of forage improvement in the United States. Euphytica 154: 263-270.

Narasimhamoorthy, B., J.H. Bouton, E.B. Blancaflor, and M.K. Sledge. 2007. Quantitative trait loci and candidate gene mapping of aluminum tolerance in diploid alfalfa. Theor. Appl. Genet. 114(5): 901-913.

Missaoui, A.M., A.H. Paterson, and J.H. Bouton. 2006. Molecular markers for the classification of switchgrass (Panicum virgatum L.) germplasm and to assess genetic diversity in three synthetic switchgrass populations. Genet. Resources Crop Evol. 53(6): 1291-1302.

Zhang, Y., M.A.R. Mian, and J.H. Bouton. 2006. Recent molecular and genomic studies on stress tolerance of forage and turf grasses. Crop Sci. 46: 497-511.

Timper, P., R.N. Gates, and J.H. Bouton. 2005. Response of Pratylenchus spp. in tall fescue infected with different strains of the fungal endophyte Neotyphodium coenophialum. Nematology 7: 105-110.

Missaoui, A.M., A.H. Paterson, and J.H. Bouton. 2005. Investigation of genomic organization in switchgrass (Panicum virgatum L.) using DNA markers. Theor. Appl. Genet. 110: 1372-1383.

Hill, N.S., J.H. Bouton, Hiatt, E.E. Jr., and B. Kittle. 2005. Seed maturity, germination, and endophyte relationships in tall fescue. Crop Sci. 45: 859-863.

Missaoui, A.M., V.A. Fasoula, and J.H. Bouton. 2005. The effect of low plant density on response to selection for biomass production in switchgrass. Euphytica 142: 1-12.

Missaoui, A.M., H.R. Boerma, and J.H. Bouton. 2005. Genetic variation and heritability of phosphorus uptake in Alamo switchgrass grown in high phosphorus soils. Field Crops Res. 93: 186-198.

Bouton, J., and S. Easton. 2005. Endophytes in forage cultivars. p. 327-340. In C.A. Roberts, C.P. West, and D.E. Spiers (ed.) Neotyphodium in cool-season grasses, current research and applications. Blackwell Publishing, Ames, IA.

Bouton, J.H., D.R. Woodfield, C.S. Hoveland, M.A. McCann, and J.R. Caradus. 2005. Enhanced survival and animal performance from ecotype derived white clover cultivars. Crop Sci. 45:1596-1602.

Bouton, J.H., D.R. Woodfield, J.R. Caradus, and D.T. Wood. 2005. Registration of 'Patriot' white clover. Crop Sci. 45:797-798.

Bouton, J.H., D.R. Woodfield, J.R. Caradus, and D.T. Wood. 2005. Registration of 'Durana' white clover. Crop Sci. 45:797.

Barrett, B., A. Griffiths, M. Schreiber, N. Ellison, C. Mercer, J. Bouton, B. Ong, J. Forster, T. Sawbridge, G. Spangenberg, G. Bryan, and D. Woodfield. 2004. A microsatellite map of white clover. Theor. Appl. Genet. 109: 596-608.

Watson, R.H., M.A. McCann, J.A. Parish, C.S. Hoveland, F.N. Thompson, and J.H. Bouton. 2004. Productivity of cow-calf pairs grazing tall fescue pastures infected with either the wild-type endophyte or a nonergot alkaloid-producing endophyte strain, AR542. J. Anim. Sci. 82: 3388-3393.

Rosellini, D., P. Barone, J. Bouton, P. Lafayette, M. Sledge, F. Veronesi, and W. Parrott. 2003. Alfalfa for acid soils: A biotech approach. Czech J. Genet. Plant Breed. 39 (special issue): 168-172.

Parish, J.A., M. A. McCann, R. H. Watson, C. S. Hoveland, L. L. Hawkins, N. S. Hill, and J. H. Bouton . 2003. Use of nonergot alkaloid-producing endophytes for alleviating tall fescue toxicosis in sheep. J. Anim Sci. 81: 1316-1322.

Parish, J.A., M.A. McCann, R.H. Watson, N.N. Paiva, C.S. Hoveland, A.H. Parks, B.L. Upchurch, N.S. Hill, and J.H. Bouton. 2003. Use of nonergot alkaloid-producing endophytes for alleviating tall fescue toxicosis in stocker cattle. J. Anim Sci. 81: 2856-2868.

Sledge, M.K., J.H. Bouton, and G. Kochert. 2003. Shifts in pest resistance, fall dormancy, and yield in 12-, 24-, and 120-parent grazing tolerant synthetics derived from CUF 101 alfalfa. Crop Sci. 43:1736-1740.

Bouton, J.H., and R.N. Gates. 2003. Grazing tolerant alfalfas perform well under rotational stocking and hay management. Agron J. 95: 1461-1464.

Bouton, J.H., and A.A. Hopkins. 2003. Commercial applications of endophytic fungi. p. 495-516. In J.F. White, C.W. Bacon, N.L. Hywel-Jones, and J.W. Spatafora (eds.) Clavicipitalean Fungi: Evoluntionary Biology, Chemistry, Biocontrol, and Cultural Impacts. Marcel Dekker, Inc., New York.